HIV-GenomePro Platform – Witec AG

Art No | GENOMEPRO
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Unleash the Power of Deep Sequencing: Our HIV Drug Resistance Platform

Description

Traditional methods for detecting HIV drug resistance (HIVDR) rely on Sanger sequencing. However, this technology suffers from limitations:

  • Low Throughput: It can only analyze a small number of samples at a time.
  • Limited Sensitivity: It struggles to detect rare drug-resistant variants.

MGI's cutting-edge platform addresses these challenges by leveraging massively parallel sequencing (MPS) technology. This advanced approach allows us to:

  • Analyze large sample volumes efficiently.
  • Detect even the rarest drug-resistant variants with exceptional sensitivity.

Here's how it works:

  1. Targeted Sequencing: We analyze specific HIV gene regions using MPS.
  2. Comprehensive Analysis: Sequenced data is compared to known wild-type and drug-resistant strains to identify potential mutations related to drug resistance.
  3. Expert Interpretation: A sophisticated drug resistance explanation system determines the level and type of drug resistance present.

Unmatched Functionality:

  • Automated Analysis: Streamline your workflow with features like:
    • Genotype/subtype annotation
    • Data quality control
    • Coverage statistics
    • HIV concentration calculation
  • Advanced Insights: Gain deeper understanding with:
    • PR-RT-IN gene assembly
    • Virus evolution tracing analysis
    • SNP and InDel detection
  • Drug Resistance Expertise: Utilize drug resistance annotations based on the Stanford University HIVDB database.
  • Network Analysis Integration: Integrate with HIV-TRACE for advanced network analysis of viral mutations.
Workflow-GenomePro-Platform
Instruments-needed

Supplier

MGI Tech Latvia
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Specifications

CPU

Intel Xeon Gold 6430 x 2

CPU threads

128

Memory

256 GB

Storage HDD

40TB (available 28 TB)

Storage SSD

2TB + 500GB

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